VirusAwareScopes - Machine Learning-Driven Adaptive Microscopy for Long-Term Viral Infection Studies


Funding Image
Alias: VirusAwareScopes
Agency: La Caixa Foundation
Type: Health Research
Principal Investigator: Ricardo Henriques
Start-date: November 2025
End-date: October 2028

VirusAwareScopes addresses a fundamental challenge in viral research: high-resolution imaging inherently damages living cells, preventing long-term observation of infection dynamics. This project develops an intelligent microscopy platform that adapts imaging conditions in real-time using machine learning, enabling sustained nanoscale imaging while preserving cell viability. By combining multiple super-resolution modalities with AI-driven adaptive optics and PhotoFiTT technology to predict phototoxicity, the system achieves observation periods of 24+ hours while maintaining sub-120nm resolution. The platform will initially map complete HIV-1 infection cycles whilst remaining deployable to standard microscopy setups through integration with established frameworks.

Technology explored


DL4MicEverywhere DL4MicEverywhere Newest update: 2025-11-12
mAIcrobe mAIcrobe Newest update: 2025-11-12
NanoPyx NanoPyx Newest update: 2025-11-11
ZeroCostDL4Mic ZeroCostDL4Mic Newest update: 2025-11-11
BioImage Model Zoo BioImage Model Zoo Newest update: 2025-11-05
CLEM-Reg CLEM-Reg Newest update: 2025-10-22
SReD SReD Newest update: 2025-09-29
CellTracksColab CellTracksColab Newest update: 2025-08-20
NanoJ-eSRRF NanoJ-eSRRF Newest update: 2025-05-30
PhotoFiTT PhotoFiTT Newest update: 2025-03-13
CARE CARE Newest update: 2024-10-05
NanoJ NanoJ Newest update: 2024-03-22
NanoJ-SRRF NanoJ-SRRF Newest update: 2024-03-22
nano-org nano-org Newest update: 2024-01-01
vLume vLume Newest update: 2020-10-12
Nuclear-Pores as references Nuclear-Pores as references Newest update: 2019-09-27
NanoJ-Fluidics NanoJ-Fluidics Newest update: 2019-04-04
NanoJ-VirusMapper NanoJ-VirusMapper Newest update: 2016-01-01
QuickPALM QuickPALM Newest update: 2010-01-01